Package: Rceattle
Title: Fits the Multispecies Assessment Model (CEATTLE) Using TMB
Version: 5.66.1
Authors@R: 
    person(given = "Grant",
           family = "Adams",
           role = c("aut", "cre"),
           email = "grant.adams@noaa.gov",
           comment = c(ORCID = "0000-0003-0297-8347"))
Description: Implements the CEATTLE model using Template Model Builder
        ('TMB'; Kristensen et al. 2015), which can be installed
        following <https://github.com/kaskr/adcomp/wiki/Download>.
        Structured similar to the original manuscript in terms of
        modularization. Separate functions estimate retrospective
        temperature- and size-specific predator rations, prey
        preference, and weight-at-age. These are then used as inputs to
        the CEATTLE model to evaluate how predation mortality,
        recruitment, and survival of three target species change under
        historical climate conditions and harvest rates.
URL: https://afsc-assessments.github.io/Rceattle/,
        https://github.com/afsc-assessments/Rceattle
BugReports: https://github.com/afsc-assessments/Rceattle/issues
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Roxygen: list(markdown = TRUE)
Imports: dplyr, ggplot2 (>= 3.5.0), MASS, readxl, TMB (>= 1.7.16),
        writexl, parallel, tidyr, R.utils, stats, graphics, grDevices,
        cowplot, rlang, reformulas, plyr, tidyselect, magrittr, Matrix,
        yaml
LinkingTo: TMB, RcppEigen
Suggests: testthat (>= 3.2.0), covr, rmarkdown, knitr, mvtnorm,
        pkgdown, TMBhelper, RcppEigen, tibble, withr
Remotes: TMBhelper=github::kaskr/TMB_contrib_R/TMBhelper
VignetteBuilder: knitr
Depends: R (>= 4.1.0)
Config/testthat/edition: 3
Config/testthat/parallel: true
Config/testthat/start-first: report-tables, golden-regression,
        convergence-variance-collapse,
        selectivity-nonparametric-integrable, fit-config-overlay,
        functions-sim-mod-diet-roundtrip-dm,
        functions-sim-mod-comp-fold,
        functions-sim-mod-diet-roundtrip-mn,
        functions-sim-mod-diet-dispersion, functions-retrospective
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: https://noaa-fisheries-integrated-toolbox.r-universe.dev
Date/Publication: 2026-10-26 23:01:40 UTC
RemoteUrl: https://github.com/grantdadams/Rceattle
RemoteRef: HEAD
RemoteSha: 2b86271b70cffeb0710938fb4e56b6f287881b23
NeedsCompilation: yes
Packaged: 2026-10-26 23:36:40 UTC; root
Author: Grant Adams [aut, cre] (ORCID: <https://orcid.org/0000-0003-0297-8347>)
Maintainer: Grant Adams <grant.adams@noaa.gov>