Package: AgeingError 2.0.2

Ian G. Taylor

AgeingError: Estimating ageing error with 'TMB' from double reads

Implements Generalized Linear Mixed Effect Models (GLMMs) using 'TMB' to estimate ageing error from double reads of otoliths. The original analysis (Punt et al. 2008; <doi:10.1139/F08-111>) was written in `ADMB` and focused on estimating imprecision and bias. The newer version of the software allows for random effects using `TMB`.

Authors:Andre E. Punt [aut], Kelli F. Johnson [aut], James T. Thorson [ctb, cph], Ian G. Taylor [aut, cre], Paul Burch [aut], Ian J. Stewart [ctb], Melissa A. Haltuch [ctb]

AgeingError_2.0.2.tar.gz
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AgeingError_2.0.2.tgz(r-4.5-x86_64)AgeingError_2.0.2.tgz(r-4.5-arm64)AgeingError_2.0.2.tgz(r-4.4-x86_64)AgeingError_2.0.2.tgz(r-4.4-arm64)AgeingError_2.0.2.tgz(r-4.3-x86_64)AgeingError_2.0.2.tgz(r-4.3-arm64)
AgeingError_2.0.2.tar.gz(r-4.5-noble)AgeingError_2.0.2.tar.gz(r-4.4-noble)
AgeingError_2.0.2.tgz(r-4.4-emscripten)AgeingError_2.0.2.tgz(r-4.3-emscripten)
AgeingError.pdf |AgeingError.html
AgeingError/json (API)
NEWS

# Install 'AgeingError' in R:
install.packages('AgeingError', repos = c('https://noaa-fisheries-integrated-toolbox.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/pfmc-assessments/ageingerror/issues

Pkgdown site:https://pfmc-assessments.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

3.78 score 10 stars 16 exports 12 dependencies

Last updated 7 months agofrom:967a6fa4b9. Checks:1 OK, 11 WARNING. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKMar 20 2025
R-4.5-win-x86_64WARNINGMar 20 2025
R-4.5-mac-x86_64WARNINGMar 20 2025
R-4.5-mac-aarch64WARNINGMar 20 2025
R-4.5-linux-x86_64WARNINGMar 20 2025
R-4.4-win-x86_64WARNINGMar 20 2025
R-4.4-mac-x86_64WARNINGMar 20 2025
R-4.4-mac-aarch64WARNINGMar 20 2025
R-4.4-linux-x86_64WARNINGMar 20 2025
R-4.3-win-x86_64WARNINGMar 20 2025
R-4.3-mac-x86_64WARNINGMar 20 2025
R-4.3-mac-aarch64WARNINGMar 20 2025

Exports:ageing_comparisoncMxCreateDataCreateSpecsDoApplyAgeErrorestgrowth.vbfitminimizerplot_outputPlotOutputFnProcessResultsrMxrunRunFnSimulatorFnStepwiseFn

Dependencies:clievaluatefshighrknitrlatticeMatrixRcppRcppEigenTMBxfunyaml