Package: LHsampling 0.1.0
LHsampling: Functions For Simulating Fish Populations And Estimating Life History Parameters
An individual-based model (IBM) incorporating within-population variability in von Bertalanffy growth, size-dependent natural mortality, and a size-selective fishery to simulate an exploited fish population and catch (harvest). A bootstrap algorithm allows the user to investigate various sampling approaches including sampling strategy (proportional or fixed otolith sampling, POS or FOS, respectively), sample size, supplementation with fishery-independent sampling, and assumptions regarding von Bertalanffy t0 and the relationship between variance of length at age and age. A function to produce plots of the bootstrap sampling results is also provided.
Authors:
LHsampling_0.1.0.tar.gz
LHsampling_0.1.0.zip(r-4.5)LHsampling_0.1.0.zip(r-4.4)LHsampling_0.1.0.zip(r-4.3)
LHsampling_0.1.0.tgz(r-4.4-any)LHsampling_0.1.0.tgz(r-4.3-any)
LHsampling_0.1.0.tar.gz(r-4.5-noble)LHsampling_0.1.0.tar.gz(r-4.4-noble)
LHsampling_0.1.0.tgz(r-4.4-emscripten)LHsampling_0.1.0.tgz(r-4.3-emscripten)
LHsampling.pdf |LHsampling.html✨
LHsampling/json (API)
NEWS
# Install 'LHsampling' in R: |
install.packages('LHsampling', repos = c('https://noaa-fisheries-integrated-toolbox.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/noaa-lhp/lhsampling/issues
Last updated 10 months agofrom:9f3e21da53. Checks:OK: 1 WARNING: 6. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 19 2024 |
R-4.5-win | WARNING | Nov 19 2024 |
R-4.5-linux | WARNING | Nov 19 2024 |
R-4.4-win | WARNING | Nov 19 2024 |
R-4.4-mac | WARNING | Nov 19 2024 |
R-4.3-win | WARNING | Nov 19 2024 |
R-4.3-mac | WARNING | Nov 19 2024 |
Exports:LH_plotLH_samplesimulate_population_harvest
Dependencies:assertthatclicolorspacedplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcppreshaperlangscalestibbletidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
LH_plot | LH_plot |
LH_sample | LH_sample |
Simulated population and harvest for Prisitpomoides auricilla | S1 |
Simulate Population Harvest | simulate_population_harvest |